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Comparative Antibody Repertoire Portal

AIRR-Seq Repertoire Metrics, CDR3 Distributions, & Cross-Species Immunogenomics

🌐 Pan-Vertebrate Repertoire Universe
Pan-Vertebrate Antibody Repertoire Dynamics
Comparative high-throughput repertoire analytics across major model, therapeutic, and evolutionary species. Examine evolutionary shifts in CDR-H3 loop length, V-gene family usage frequencies, somatic hypermutation (SHM) load, and light chain kappa-vs-lambda locus balance.
10
Repertoire Species
50M+
AIRR Reads Analyzed
65 aa
Max Bovine CDR-H3
100%
AIRR Compliant
🌐 Select Repertoire Species for Deep Inspection
Click to view species-specific repertoire parameters
📈 Heavy Chain Ancestral Clan Distribution

Evolutionary breakdown across Clan I (tetrapod tandem expanded), Clan II (altered geometry), and Clan III (universal ancestral backbone).

⚡ Somatic Hypermutation (SHM) Frequency Spectrum

Mean nucleotide somatic divergence in antigen-experienced memory repertoires compared to unmutated naive baselines.

🧬 CDR-H3 Loop Length Distribution Across Vertebrates
Amino Acid Length (IMGT pos 105 to 117)

CDR-H3 loop length is the primary determinant of antigen-binding paratope geometry. While rodent and human repertoires center around 11–16 amino acids, bovine antibodies exhibit extreme ultralong loops (up to 65+ amino acids) forming an independent $eta$-ribbon stalk with a disulfide-rich knob mini-domain. Camelid single-domain antibodies maintain extended loops (18–24 aa) to penetrate cryptic cavities.

⚖️ The Evolutionary Shift: Kappa vs. Lambda Light Chain Utilization

Vertebrates display dramatic, clade-specific evolutionary shifts in light chain locus utilization. Mice and humans favor Kappa, whereas canines, equines, and artiodactyls (bovine/ovine) show near-total Lambda dominance.

⚡ Batch Repertoire Profiler & AIRR TSV Generator
Paste Multi-FASTA or TSV reads